head 1.9; access; symbols pkgsrc-2023Q4:1.9.0.4 pkgsrc-2023Q4-base:1.9 pkgsrc-2023Q3:1.9.0.2 pkgsrc-2023Q3-base:1.9 pkgsrc-2023Q2:1.6.0.2 pkgsrc-2023Q2-base:1.6 pkgsrc-2023Q1:1.5.0.6 pkgsrc-2023Q1-base:1.5 pkgsrc-2022Q4:1.5.0.4 pkgsrc-2022Q4-base:1.5 pkgsrc-2022Q3:1.5.0.2 pkgsrc-2022Q3-base:1.5 pkgsrc-2022Q2:1.4.0.2 pkgsrc-2022Q2-base:1.4 pkgsrc-2022Q1:1.3.0.8 pkgsrc-2022Q1-base:1.3 pkgsrc-2021Q4:1.3.0.6 pkgsrc-2021Q4-base:1.3 pkgsrc-2021Q3:1.3.0.4 pkgsrc-2021Q3-base:1.3 pkgsrc-2021Q2:1.3.0.2 pkgsrc-2021Q2-base:1.3 pkgsrc-2021Q1:1.2.0.24 pkgsrc-2021Q1-base:1.2 pkgsrc-2020Q4:1.2.0.22 pkgsrc-2020Q4-base:1.2 pkgsrc-2020Q3:1.2.0.20 pkgsrc-2020Q3-base:1.2 pkgsrc-2020Q2:1.2.0.18 pkgsrc-2020Q2-base:1.2 pkgsrc-2020Q1:1.2.0.14 pkgsrc-2020Q1-base:1.2 pkgsrc-2019Q4:1.2.0.16 pkgsrc-2019Q4-base:1.2 pkgsrc-2019Q3:1.2.0.12 pkgsrc-2019Q3-base:1.2 pkgsrc-2019Q2:1.2.0.10 pkgsrc-2019Q2-base:1.2 pkgsrc-2019Q1:1.2.0.8 pkgsrc-2019Q1-base:1.2 pkgsrc-2018Q4:1.2.0.6 pkgsrc-2018Q4-base:1.2 pkgsrc-2018Q3:1.2.0.4 pkgsrc-2018Q3-base:1.2 pkgsrc-2018Q2:1.2.0.2 pkgsrc-2018Q2-base:1.2; locks; strict; comment @# @; 1.9 date 2023.09.14.00.39.17; author bacon; state Exp; branches; next 1.8; commitid as2t7XLlHAYEKFEE; 1.8 date 2023.08.14.05.23.51; author wiz; state Exp; branches; next 1.7; commitid LOSB79OLVxvXjIAE; 1.7 date 2023.07.18.12.57.52; author nia; state Exp; branches; next 1.6; commitid MnzINKtMQl8DHhxE; 1.6 date 2023.05.28.22.48.27; author bacon; state Exp; branches; next 1.5; commitid 2xcMmRnzVVMOAMqE; 1.5 date 2022.06.28.11.31.01; author wiz; state Exp; branches; next 1.4; commitid D2UoJrTHpoHEANJD; 1.4 date 2022.04.10.20.54.51; author bacon; state Exp; branches; next 1.3; commitid TQj3iJRfIuYUeHzD; 1.3 date 2021.06.11.13.47.40; author bacon; state Exp; branches; next 1.2; commitid ueYGTanmtjc5DIWC; 1.2 date 2018.04.29.21.00.04; author adam; state Exp; branches; next 1.1; commitid TepAfzzwvF4BDnAA; 1.1 date 2018.04.27.20.28.28; author bacon; state Exp; branches; next ; commitid PIQsEyVN4kVJw7AA; desc @@ 1.9 log @biology/ncbi-blast+: Update to 2.14.1 A few minor fixes and enhancements Changes: https://www.ncbi.nlm.nih.gov/books/NBK131777/ @ text @# $NetBSD: buildlink3.mk,v 1.8 2023/08/14 05:23:51 wiz Exp $ BUILDLINK_TREE+= ncbi-blast+ .if !defined(NCBI_BLAST+_BUILDLINK3_MK) NCBI_BLAST+_BUILDLINK3_MK:= USE_CXX_FEATURES= c++17 BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.14.1 BUILDLINK_ABI_DEPENDS.ncbi-blast++= ncbi-blast+>=2.14.1 BUILDLINK_PKGSRCDIR.ncbi-blast+?= ../../biology/ncbi-blast+ .endif # NCBI_BLAST+_BUILDLINK3_MK BUILDLINK_TREE+= -ncbi-blast+ @ 1.8 log @*: recursive bump for Python 3.11 as new default @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.7 2023/07/18 12:57:52 nia Exp $ d8 1 a8 1 USE_CXX_FEATURES+= c++17 d10 2 a11 2 BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.14.0 BUILDLINK_ABI_DEPENDS.ncbi-blast+?= ncbi-blast+>=2.14.0nb1 @ 1.7 log @biology: Where possible, adjust packages to use USE_(CC|CXX)_FEATURES @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.6 2023/05/28 22:48:27 bacon Exp $ d11 1 @ 1.6 log @biology/ncbi-blast+: Update to 2.14.0 Several minor bug fixes, a few other enhancements Also set only for 64-bit platforms (required for most bioinformatics) Changes: https://www.ncbi.nlm.nih.gov/sites/books/NBK131777/ @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.2 2018/04/29 21:00:04 adam Exp $ d8 2 @ 1.5 log @*: recursive bump for perl 5.36 @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.4 2022/04/10 20:54:51 bacon Exp $ d8 1 a8 2 BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.13.0 BUILDLINK_ABI_DEPENDS.ncbi-blast+?= ncbi-blast+>=2.13.0nb2 @ 1.4 log @biology/ncbi-blast+: Update to 2.13.0 Several minor bug fixes and improvements since 2.11.0 Changes: https://www.ncbi.nlm.nih.gov/books/NBK131777/?report=reader @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.2 2018/04/29 21:00:04 adam Exp $ d9 1 @ 1.3 log @biology/ncbi-blast+: Update to 2.11.0 Release notes: https://www.ncbi.nlm.nih.gov/books/NBK131777/ @ text @d8 1 a8 1 BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.11.0 @ 1.2 log @ncbi-blast+: removed references to wip @ text @d1 1 a1 1 # $NetBSD: buildlink3.mk,v 1.1 2018/04/27 20:28:28 bacon Exp $ d8 1 a8 1 BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.7.1 @ 1.1 log @biology/ncbi-blast+: import ncbi-blast+-2.7.1 The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families. OK wiz@@ @ text @d1 1 a1 1 # $NetBSD$ d9 1 a9 1 BUILDLINK_PKGSRCDIR.ncbi-blast+?= ../../wip/ncbi-blast+ @