head 1.12; access; symbols pkgsrc-2023Q4:1.12.0.6 pkgsrc-2023Q4-base:1.12 pkgsrc-2023Q3:1.12.0.4 pkgsrc-2023Q3-base:1.12 pkgsrc-2023Q2:1.12.0.2 pkgsrc-2023Q2-base:1.12 pkgsrc-2023Q1:1.11.0.30 pkgsrc-2023Q1-base:1.11 pkgsrc-2022Q4:1.11.0.28 pkgsrc-2022Q4-base:1.11 pkgsrc-2022Q3:1.11.0.26 pkgsrc-2022Q3-base:1.11 pkgsrc-2022Q2:1.11.0.24 pkgsrc-2022Q2-base:1.11 pkgsrc-2022Q1:1.11.0.22 pkgsrc-2022Q1-base:1.11 pkgsrc-2021Q4:1.11.0.20 pkgsrc-2021Q4-base:1.11 pkgsrc-2021Q3:1.11.0.18 pkgsrc-2021Q3-base:1.11 pkgsrc-2021Q2:1.11.0.16 pkgsrc-2021Q2-base:1.11 pkgsrc-2021Q1:1.11.0.14 pkgsrc-2021Q1-base:1.11 pkgsrc-2020Q4:1.11.0.12 pkgsrc-2020Q4-base:1.11 pkgsrc-2020Q3:1.11.0.10 pkgsrc-2020Q3-base:1.11 pkgsrc-2020Q2:1.11.0.8 pkgsrc-2020Q2-base:1.11 pkgsrc-2020Q1:1.11.0.4 pkgsrc-2020Q1-base:1.11 pkgsrc-2019Q4:1.11.0.6 pkgsrc-2019Q4-base:1.11 pkgsrc-2019Q3:1.11.0.2 pkgsrc-2019Q3-base:1.11 pkgsrc-2019Q2:1.9.0.8 pkgsrc-2019Q2-base:1.9 pkgsrc-2019Q1:1.9.0.6 pkgsrc-2019Q1-base:1.9 pkgsrc-2018Q4:1.9.0.4 pkgsrc-2018Q4-base:1.9 pkgsrc-2018Q3:1.9.0.2 pkgsrc-2018Q3-base:1.9 pkgsrc-2018Q2:1.8.0.28 pkgsrc-2018Q2-base:1.8 pkgsrc-2018Q1:1.8.0.26 pkgsrc-2018Q1-base:1.8 pkgsrc-2017Q4:1.8.0.24 pkgsrc-2017Q4-base:1.8 pkgsrc-2017Q3:1.8.0.22 pkgsrc-2017Q3-base:1.8 pkgsrc-2017Q2:1.8.0.18 pkgsrc-2017Q2-base:1.8 pkgsrc-2017Q1:1.8.0.16 pkgsrc-2017Q1-base:1.8 pkgsrc-2016Q4:1.8.0.14 pkgsrc-2016Q4-base:1.8 pkgsrc-2016Q3:1.8.0.12 pkgsrc-2016Q3-base:1.8 pkgsrc-2016Q2:1.8.0.10 pkgsrc-2016Q2-base:1.8 pkgsrc-2016Q1:1.8.0.8 pkgsrc-2016Q1-base:1.8 pkgsrc-2015Q4:1.8.0.6 pkgsrc-2015Q4-base:1.8 pkgsrc-2015Q3:1.8.0.4 pkgsrc-2015Q3-base:1.8 pkgsrc-2015Q2:1.8.0.2 pkgsrc-2015Q2-base:1.8 pkgsrc-2015Q1:1.7.0.20 pkgsrc-2015Q1-base:1.7 pkgsrc-2014Q4:1.7.0.18 pkgsrc-2014Q4-base:1.7 pkgsrc-2014Q3:1.7.0.16 pkgsrc-2014Q3-base:1.7 pkgsrc-2014Q2:1.7.0.14 pkgsrc-2014Q2-base:1.7 pkgsrc-2014Q1:1.7.0.12 pkgsrc-2014Q1-base:1.7 pkgsrc-2013Q4:1.7.0.10 pkgsrc-2013Q4-base:1.7 pkgsrc-2013Q3:1.7.0.8 pkgsrc-2013Q3-base:1.7 pkgsrc-2013Q2:1.7.0.6 pkgsrc-2013Q2-base:1.7 pkgsrc-2013Q1:1.7.0.4 pkgsrc-2013Q1-base:1.7 pkgsrc-2012Q4:1.7.0.2 pkgsrc-2012Q4-base:1.7 pkgsrc-2012Q3:1.6.0.4 pkgsrc-2012Q3-base:1.6 pkgsrc-2012Q2:1.6.0.2 pkgsrc-2012Q2-base:1.6 pkgsrc-2012Q1:1.5.0.4 pkgsrc-2012Q1-base:1.5 pkgsrc-2011Q4:1.5.0.2 pkgsrc-2011Q4-base:1.5 pkgsrc-2011Q3:1.4.0.10 pkgsrc-2011Q3-base:1.4 pkgsrc-2011Q2:1.4.0.8 pkgsrc-2011Q2-base:1.4 pkgsrc-2011Q1:1.4.0.6 pkgsrc-2011Q1-base:1.4 pkgsrc-2010Q4:1.4.0.4 pkgsrc-2010Q4-base:1.4 pkgsrc-2010Q3:1.4.0.2 pkgsrc-2010Q3-base:1.4 pkgsrc-2010Q2:1.3.0.6 pkgsrc-2010Q2-base:1.3 pkgsrc-2010Q1:1.3.0.4 pkgsrc-2010Q1-base:1.3 pkgsrc-2009Q4:1.3.0.2 pkgsrc-2009Q4-base:1.3 pkgsrc-base:1.1.1.1 TNF:1.1.1; locks; strict; comment @# @; 1.12 date 2023.06.10.11.58.44; author mef; state Exp; branches; next 1.11; commitid 5FO939a7nFY4BosE; 1.11 date 2019.08.08.19.53.53; author brook; state Exp; branches; next 1.10; commitid K2VPfA0XCw7xfgyB; 1.10 date 2019.07.31.20.23.32; author brook; state Exp; branches; next 1.9; commitid bAZgYfJrrfDgIexB; 1.9 date 2018.07.28.14.40.50; author brook; state Exp; branches; next 1.8; commitid hIRYb3oU4xMfBULA; 1.8 date 2015.05.31.02.38.49; author wen; state Exp; branches; next 1.7; commitid fcS5RHP4hlJ9Kxny; 1.7 date 2012.12.17.15.04.19; author wen; state Exp; branches; next 1.6; 1.6 date 2012.04.15.13.28.39; author brook; state Exp; branches; next 1.5; 1.5 date 2011.12.19.22.27.05; author markd; state Exp; branches; next 1.4; 1.4 date 2010.07.30.10.36.26; author asau; state Exp; branches; next 1.3; 1.3 date 2009.12.23.23.38.46; author joerg; state Exp; branches; next 1.2; 1.2 date 2009.12.11.19.45.46; author adam; state Exp; branches; next 1.1; 1.1 date 2009.12.11.19.06.17; author adam; state Exp; branches 1.1.1.1; next ; 1.1.1.1 date 2009.12.11.19.06.17; author adam; state Exp; branches; next ; desc @@ 1.12 log @(math/R-randomForest) Updated 4.6.14 to 4.7.1.1 Changes in 4.7-1: * The long-standing wishlist item of case weights (used only in sampling) is now available (thanks to urging from Robert Tishirani and implementation by Ethan Liaw). @ text @# $NetBSD: Makefile,v 1.11 2019/08/08 19:53:53 brook Exp $ R_PKGNAME= randomForest R_PKGVER= 4.7-1.1 MAINTAINER= pkgsrc-users@@NetBSD.org COMMENT= Breiman and Cutler's Random Forests for Classification and Regression LICENSE= gnu-gpl-v2 OR gnu-gpl-v3 USE_LANGUAGES= c fortran TEST_DEPENDS+= R-RColorBrewer-[0-9]*:../../math/R-RColorBrewer .include "../../math/R/Makefile.extension" .include "../../mk/bsd.pkg.mk" @ 1.11 log @Update all R packages to canonical form. The canonical form [1] of an R package Makefile includes the following: - The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as needed), and CATEGORIES. - HOMEPAGE is not present but defined in math/R/Makefile.extension to refer to the CRAN web page describing the package. Other relevant web pages are often linked from there via the URL field. This updates all current R packages to this form, which will make regular updates _much_ easier, especially using pkgtools/R2pkg. [1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.10 2019/07/31 20:23:32 brook Exp $ d4 1 a4 2 R_PKGVER= 4.6-14 CATEGORIES= math d12 2 @ 1.10 log @R-randomForest: update to version 4.6.14. Update to the canonical form of an R package and fix the LICENSE field. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.9 2018/07/28 14:40:50 brook Exp $ d3 3 a5 1 CATEGORIES= math R a7 1 HOMEPAGE= ${R_HOMEPAGE_BASE}/genetics/ a10 3 R_PKGNAME= randomForest R_PKGVER= 4.6-14 @ 1.9 log @Remove MASTER_SITES= from individual R package Makefiles. Each R package should include ../../math/R/Makefile.extension, which also defines MASTER_SITES. Consequently, it is redundant for the individual packages to do the same. Package-specific definitions also prevent redefining MASTER_SITES in a single common place. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.8 2015/05/31 02:38:49 wen Exp $ d3 1 a3 1 CATEGORIES= math d7 2 a8 2 COMMENT= Classification and regression based on a forest of trees LICENSE= gnu-gpl-v2 d11 1 a11 1 R_PKGVER= 4.6-10 @ 1.8 log @Update to 4.6.10 Upstream changes: Changes in 4.6-10: * Fixed bugs introduced in 4.6-8 and 4.6-9. Levels for ordered factors in predictors are no longer checked for consistency between training and test data in predict.randomForest(). In 4.6-9 the response is mean centered before running the algorithm (for regression), but the mean was not added back in the $y component of the return object from randomForest(). Changes in 4.6-9: * Categorical predictors are allowed to have up to 53 categories now. Changes in 4.6-8: * There was a bug in the handling of ordered factors in randomForest.formula(). (Reported by Barry Rawlingson.) * Changed randomForest.formula() and predict.randomForest() so that predict() without newdata when na.action=na.exclude pads the output with NAs to match the rows in the original data (suggested by Barry Rawlingson.). * There was a long standing bug in randomForest(..., proximity=TRUE, oob.prox=FALSE) in regression mode. (Thanks to Stefano Romano for the report.) @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.7 2012/12/17 15:04:19 wen Exp $ a3 1 MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/} @ 1.7 log @Update to 4.6.7 No upstream changelog. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.6 2012/04/15 13:28:39 brook Exp $ d12 1 a12 1 R_PKGVER= 4.6-7 @ 1.6 log @Update to randomForest v4.6-6. Add a LICENSE. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.5 2011/12/19 22:27:05 markd Exp $ d12 1 a12 1 R_PKGVER= 4.6-6 @ 1.5 log @s/fortran77/fortran/ - use same fortran as R itself. No PKGREVISION bump as either this is unchanged or didn't previously build @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.4 2010/07/30 10:36:26 asau Exp $ d9 1 d12 1 a12 1 R_PKGVER= 4.5-34 @ 1.4 log @"fortran" -> "fortran77" except where it is clear that it isn't F77. "fortran" is alias of "fortran77" for now, but it will change later. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.3 2009/12/23 23:38:46 joerg Exp $ d13 1 a13 1 USE_LANGUAGES= c fortran77 @ 1.3 log @Needs C and Fortran. From PR 42506. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.2 2009/12/11 19:45:46 adam Exp $ d13 1 a13 1 USE_LANGUAGES= c fortran @ 1.2 log @Wrong path in Makefile @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.1.1.1 2009/12/11 19:06:17 adam Exp $ d13 2 @ 1.1 log @Initial revision @ text @d1 1 a1 1 # $NetBSD$ d13 1 a13 1 .include "../../adam/R/Makefile.extension" @ 1.1.1.1 log @Classification and regression based on a forest of trees using random inputs. @ text @@