head 1.8; access; symbols pkgsrc-2023Q4:1.7.0.6 pkgsrc-2023Q4-base:1.7 pkgsrc-2023Q3:1.7.0.4 pkgsrc-2023Q3-base:1.7 pkgsrc-2023Q2:1.7.0.2 pkgsrc-2023Q2-base:1.7 pkgsrc-2023Q1:1.6.0.4 pkgsrc-2023Q1-base:1.6 pkgsrc-2022Q4:1.6.0.2 pkgsrc-2022Q4-base:1.6 pkgsrc-2022Q3:1.5.0.8 pkgsrc-2022Q3-base:1.5 pkgsrc-2022Q2:1.5.0.6 pkgsrc-2022Q2-base:1.5 pkgsrc-2022Q1:1.5.0.4 pkgsrc-2022Q1-base:1.5 pkgsrc-2021Q4:1.5.0.2 pkgsrc-2021Q4-base:1.5 pkgsrc-2021Q3:1.3.0.2 pkgsrc-2021Q3-base:1.3 pkgsrc-2021Q2:1.2.0.8 pkgsrc-2021Q2-base:1.2 pkgsrc-2021Q1:1.2.0.6 pkgsrc-2021Q1-base:1.2 pkgsrc-2020Q4:1.2.0.4 pkgsrc-2020Q4-base:1.2 pkgsrc-2020Q3:1.2.0.2 pkgsrc-2020Q3-base:1.2 pkgsrc-2020Q2:1.1.0.16 pkgsrc-2020Q2-base:1.1 pkgsrc-2020Q1:1.1.0.12 pkgsrc-2020Q1-base:1.1 pkgsrc-2019Q4:1.1.0.14 pkgsrc-2019Q4-base:1.1 pkgsrc-2019Q3:1.1.0.10 pkgsrc-2019Q3-base:1.1 pkgsrc-2019Q2:1.1.0.8 pkgsrc-2019Q2-base:1.1 pkgsrc-2019Q1:1.1.0.6 pkgsrc-2019Q1-base:1.1 pkgsrc-2018Q4:1.1.0.4 pkgsrc-2018Q4-base:1.1 pkgsrc-2018Q3:1.1.0.2 pkgsrc-2018Q3-base:1.1; locks; strict; comment @# @; 1.8 date 2024.01.23.23.50.03; author mef; state Exp; branches; next 1.7; commitid WjZreIu5UMfHeDVE; 1.7 date 2023.06.17.10.52.59; author mef; state Exp; branches; next 1.6; commitid fvzwtYV0Vcgz0itE; 1.6 date 2022.12.18.07.51.37; author mef; state Exp; branches; next 1.5; commitid SbQBnpyONkb6P06E; 1.5 date 2021.10.26.10.55.22; author nia; state Exp; branches; next 1.4; commitid vzl6zVlmjiF3hjeD; 1.4 date 2021.10.07.14.27.45; author nia; state Exp; branches; next 1.3; commitid wLkpKfebF6VS3TbD; 1.3 date 2021.09.19.02.55.21; author mef; state Exp; branches; next 1.2; commitid qoRfCRSfsJc3Ov9D; 1.2 date 2020.09.20.23.12.14; author mef; state Exp; branches; next 1.1; commitid RiO5dxSzLHvHeQoC; 1.1 date 2018.09.17.13.24.18; author maya; state Exp; branches; next ; commitid kbqftoGqsBVpzsSA; desc @@ 1.8 log @(math/R-RNetCDF) Updated 2.6.2 5o 2.9.1, make test does not pass Version 2.9-1, 2023-12-30 * Fix support for parallel I/O with MPICH (and related MPI variants) * Fix error handlers to remove potentially insecure format strings Version 2.8-1, 2023-10-21 * Fix builds on platforms where share directory is not under $R_HOME * Fix UBSAN warning when converting empty NC_CHAR to R string * Fix type conversions with oneAPI compiler Version 2.7-1, 2023-10-02 * Fix crash when calling nc_free_vlen on vlen with zero-length * Support packing and unpacking of vlen * Support fill value conversions in non-numeric data types: NC_CHAR, NC_STRING, enum, compound, and vlen * Improve support for NetCDF parallel I/O in configure script: - Specify MPI compiler via argument --with-mpicc - Enable MPI tests in R CMD check via argument --with-mpiexec - Give warnings if MPI and/or NetCDF parallel I/O not detected * Add configure option --with-nc-config-static to allow selection of static libraries from nc-config * Build Windows package with NetCDF library from RTools4x - Adapt to newer RTools by using configure script on Windows * Add examples using hierarchical groups to help for grp.inq.nc @ text @$NetBSD: distinfo,v 1.7 2023/06/17 10:52:59 mef Exp $ BLAKE2s (R/RNetCDF_2.9-1.tar.gz) = e213b0d0911f85acc398a1e1f23c43257d394e08adafda3fbd57643b22b2b2e1 SHA512 (R/RNetCDF_2.9-1.tar.gz) = b651c5912fbddfe19feff76be1969ebd721f6e768158c1baf13d62e5036963dfb28682db631d8f77314073256b6dd64a9b84f9a3f7e648d8b182a64cd0276286 Size (R/RNetCDF_2.9-1.tar.gz) = 160520 bytes @ 1.7 log @(math/R-RNetCDF) Updated 2.6.1 to 2.6.2 Version 2.6-2, 2023-01-16 * Fix compiler warnings reported by R-devel @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.6 2022/12/18 07:51:37 mef Exp $ d3 3 a5 4 BLAKE2s (R/RNetCDF_2.6-2.tar.gz) = 37fd0282885e3884caaa11d42a0860bcd2d1aaa10ddbc20b7be2a9bd05bf8243 SHA512 (R/RNetCDF_2.6-2.tar.gz) = ce79c1ff9948ffca3e8c3b61801a6705377c000b3a0017ae83e29bb87050cc9c73546d06eb310f1d98cf9f32b10509fbfa3d1af3b8ebf2da1820720b32d5109e Size (R/RNetCDF_2.6-2.tar.gz) = 144105 bytes SHA1 (patch-configure) = b8309c6e26be3039e8d86482979f031887abd123 @ 1.6 log @(math/R-RNetCDF) Updated 2.5.2 to 2.6.1 Version 2.6-1, 2021-06-25 * Windows: update binary packages to netcdf 4.9.0 with OpenDAP @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.5 2021/10/26 10:55:22 nia Exp $ d3 3 a5 3 BLAKE2s (R/RNetCDF_2.6-1.tar.gz) = e5e2a81005dd26e6ba4c91646c0e8b933ca1b9403626902445b6b5bc020db434 SHA512 (R/RNetCDF_2.6-1.tar.gz) = 636168fa05728b57782f08680a047dddf4cbc25de566e3cde166a6a31f24bdee54df93345a08ad1e3c753475cf6a76bdc8a550e5cfa06c0a3c2311eb0a3286b4 Size (R/RNetCDF_2.6-1.tar.gz) = 143920 bytes @ 1.5 log @math: Replace RMD160 checksums with BLAKE2s checksums All checksums have been double-checked against existing RMD160 and SHA512 hashes @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.4 2021/10/07 14:27:45 nia Exp $ d3 3 a5 3 BLAKE2s (R/RNetCDF_2.5-2.tar.gz) = 53fa244cf2e756f1053f5d0b28809e363e89592ecb6dc81e34763909f2e49423 SHA512 (R/RNetCDF_2.5-2.tar.gz) = d12f5e96352f6ae9726a2b1f288db036a6addf2f66abc876773cfefb35e1a9cd1ff62991cec62877e00384f1687c24d905f31300f9a6d477b0f367daed24b97c Size (R/RNetCDF_2.5-2.tar.gz) = 143675 bytes @ 1.4 log @math: Remove SHA1 hashes for distfiles @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.3 2021/09/19 02:55:21 mef Exp $ d3 1 a3 1 RMD160 (R/RNetCDF_2.5-2.tar.gz) = 9ba42433793f0cce837aa4c66ee618c7a6ab2cae @ 1.3 log @(math/R-RNetCDF) Updated 2.4.2 to 2.5.2 Version 2.5-2, 2021-08-20 * Support hdf5 filters via multi-filter interface (netcdf>=4.8.0) * Windows: update binary packages to netcdf 4.7.4 with OpenDAP * Generate type conversions with m4 macros * Reduce CPU time for utcal.nc example to pass CRAN checks @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.2 2020/09/20 23:12:14 mef Exp $ a2 1 SHA1 (R/RNetCDF_2.5-2.tar.gz) = d774b638f4ed2369151a49a381462cc1f5c7b9c3 @ 1.2 log @(math/R-RNetCDF) Updated 1.9.1 to 2.4.2 Version 2.4-2, 2020-09-12 * Support reading/writing special values (e.g. NA, Inf) without substitution, mainly in cases where type conversion between R and NetCDF is not required. * Fix selection of na.mode values 0,1,2 * Fix range checks for numeric conversions with packing * Significantly increase test coverage of type conversion routines * Support parallel NetCDF when running with MPI * Allow creation of datasets in "data64" (CDF5) format * Support diskless files and in-memory manipulation of persistent files Version 2.3-1, 2020-04-27 * Fix problem when defining scalar variables with netcdf-4.7.4 Version 2.1-1, 2019-10-18 * Remove automatic handling of fill values in user-defined types * Link rwinlib libraries by pathname to fix r-hub Windows builds * Correct quoting of external software names in DESCRIPTION Version 2.0-4, 2019-10-13 * Fix OSX packages by linking expat library Version 2.0-3, 2019-10-05 * Support NetCDF-4 features for reading and writing of datasets. * Suggest bit64 package for NC_INT64 and NC_UINT64 types. * Drop support for netcdf-3.x library, require netcdf-4.x. * Drop support for udunits-1 library. * Disable calendar functions if udunits-2.x is not found during build. @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.1 2018/09/17 13:24:18 maya Exp $ d3 5 a7 5 SHA1 (R/RNetCDF_2.4-2.tar.gz) = fd68dd7e1b5dc789e8d313ff9593cf56a8075ca0 RMD160 (R/RNetCDF_2.4-2.tar.gz) = 8ff7615c3a43d83218914e9139a5bf00d9ad6c14 SHA512 (R/RNetCDF_2.4-2.tar.gz) = afd314dd0a5735ccad3579c9b9091956e7277cf8e630016264f5adef9f31831c79d85b53459e160f09e37789b3518f3cb184a100036af082abfb0533b906e1a6 Size (R/RNetCDF_2.4-2.tar.gz) = 124926 bytes SHA1 (patch-configure) = 0ff9f35b4c2ca1701c381be9f6761fd62fa33e39 @ 1.1 log @Add package R-RNetCDF version 1.9-1 An R interface to the NetCDF file format designed by Unidata for efficient storage of array-oriented scientific data and descriptions. The R interface is closely based on the C API of the NetCDF library, and it includes calendar conversions from the Unidata UDUNITS library. The current implementation supports all operations on NetCDF datasets in classic and 64-bit offset file formats, and NetCDF4-classic format is supported for reading and modification of existing files. From Kai-Uwe Eckhardt, updated as the previous distfile wasn't available. PR pkg/51607 @ text @d1 1 a1 1 $NetBSD: distinfo,v 1.4 2015/11/03 23:33:29 agc Exp $ d3 5 a7 5 SHA1 (R/RNetCDF_1.9-1.tar.gz) = 720b4146271bd8a5156f9d3810d2c9bd1eee76ef RMD160 (R/RNetCDF_1.9-1.tar.gz) = b473a5eb57df4d48b96eea8b4b347bda2f2ded52 SHA512 (R/RNetCDF_1.9-1.tar.gz) = 3a1cd3b9b7996ffc40b14f4ac6bee78c5ea68cad8e4f68e0ba64ecfd6bb26e9e349cfacac8dac910dd5c57d6f4e8dbad6f47e48632b57a7a2d962381e6ff75f7 Size (R/RNetCDF_1.9-1.tar.gz) = 98628 bytes SHA1 (patch-configure) = 62e98e78ae4338ce7bad04dbcb69fdb60cef5b8f @