head 1.9; access; symbols pkgsrc-2026Q1:1.9.0.12 pkgsrc-2026Q1-base:1.9 pkgsrc-2025Q4:1.9.0.10 pkgsrc-2025Q4-base:1.9 pkgsrc-2025Q3:1.9.0.8 pkgsrc-2025Q3-base:1.9 pkgsrc-2025Q2:1.9.0.6 pkgsrc-2025Q2-base:1.9 pkgsrc-2025Q1:1.9.0.4 pkgsrc-2025Q1-base:1.9 pkgsrc-2024Q4:1.9.0.2 pkgsrc-2024Q4-base:1.9 pkgsrc-2024Q3:1.8.0.8 pkgsrc-2024Q3-base:1.8 pkgsrc-2024Q2:1.8.0.6 pkgsrc-2024Q2-base:1.8 pkgsrc-2024Q1:1.8.0.4 pkgsrc-2024Q1-base:1.8 pkgsrc-2023Q4:1.8.0.2 pkgsrc-2023Q4-base:1.8 pkgsrc-2023Q3:1.7.0.8 pkgsrc-2023Q3-base:1.7 pkgsrc-2023Q2:1.7.0.6 pkgsrc-2023Q2-base:1.7 pkgsrc-2023Q1:1.7.0.4 pkgsrc-2023Q1-base:1.7 pkgsrc-2022Q4:1.7.0.2 pkgsrc-2022Q4-base:1.7 pkgsrc-2022Q3:1.6.0.4 pkgsrc-2022Q3-base:1.6 pkgsrc-2022Q2:1.6.0.2 pkgsrc-2022Q2-base:1.6 pkgsrc-2022Q1:1.5.0.2 pkgsrc-2022Q1-base:1.5 pkgsrc-2021Q4:1.4.0.2 pkgsrc-2021Q4-base:1.4 pkgsrc-2021Q3:1.3.0.2 pkgsrc-2021Q3-base:1.3 pkgsrc-2021Q2:1.2.0.2 pkgsrc-2021Q2-base:1.2 pkgsrc-2021Q1:1.1.0.2 pkgsrc-2021Q1-base:1.1; locks; strict; comment @# @; 1.9 date 2024.11.29.15.28.16; author bacon; state Exp; branches; next 1.8; commitid cxWsXG1AFTfCsyzF; 1.8 date 2023.10.28.20.39.31; author bacon; state Exp; branches; next 1.7; commitid 5dE5WpKA6GtKYqKE; 1.7 date 2022.12.11.21.18.27; author bacon; state Exp; branches; next 1.6; commitid TtDBraKnKLEJvb5E; 1.6 date 2022.06.11.19.46.43; author bacon; state Exp; branches; next 1.5; commitid gis67bMXZyHOSEHD; 1.5 date 2022.03.15.21.12.52; author bacon; state Exp; branches; next 1.4; commitid n6G019AVHuhVbmwD; 1.4 date 2021.12.14.19.10.43; author bacon; state Exp; branches; next 1.3; commitid HB8PGvXMYzDYqEkD; 1.3 date 2021.08.28.18.39.37; author bacon; state Exp; branches; next 1.2; commitid 36ZclaSrjO1XJL6D; 1.2 date 2021.06.11.17.22.40; author bacon; state Exp; branches; next 1.1; commitid bjRaIzuax4GPOJWC; 1.1 date 2021.03.24.15.22.29; author bacon; state Exp; branches; next ; commitid ULlhDaIsK6FjHzMC; desc @@ 1.9 log @biology/vcf-split: Update to 0.1.5.19 Unbreak when using non-default PKGMANDIR @ text @@@comment $NetBSD$ bin/vcf-split man/man1/vcf-split.1 @ 1.8 log @biology/vcf-split: Update to 0.1.5.10 Updates for new libxtend API @ text @@ 1.7 log @biology/vcf-split: Update to 0.1.5.4 Update for biolibc API changes @ text @@ 1.6 log @biology/vcf-split: Update to 0.1.5 Use latest biolibc API Minor build system improvements https://github.com/auerlab/vcf-split/releases @ text @@ 1.5 log @biology/vcf-split: Update to 0.1.4 Minor update for biolibc 0.2.2 API changes @ text @@ 1.4 log @biology/vcf-split: Update to 0.1.3.3 Transfer header from multi-sample input Updates for evolving libxtend and biolibc APIs Add --version flag Numerous minor fixes and enhancements @ text @@ 1.3 log @biology/vcf-split: Update to 0.1.2.14 Updates for libxtend and biolibc API changes @ text @@ 1.2 log @biology/vcf-split: Update to 0.1.2 Updates for new biolibc API Upstream change log: https://github.com/auerlab/vcf-split/releases @ text @@ 1.1 log @biology/vcf-split: import vcf-split-0.1.1 Vcf-split splits a multi-sample VCF into single-sample VCFs, writing thousands of output files simultaneously. Parsing the TOPMed human chromosome 1 BCF with bcftools takes two days, so extracting the 137,977 samples one at a time or using thousands of parallel readers of the same file is impractical. Vcf-split solves this by generating thousands of single-sample outputs during a single sweep through the multi-sample input. @ text @@