head 1.2; access; symbols pkgsrc-2026Q1:1.2.0.10 pkgsrc-2026Q1-base:1.2 pkgsrc-2025Q4:1.2.0.8 pkgsrc-2025Q4-base:1.2 pkgsrc-2025Q3:1.2.0.6 pkgsrc-2025Q3-base:1.2 pkgsrc-2025Q2:1.2.0.4 pkgsrc-2025Q2-base:1.2 pkgsrc-2025Q1:1.2.0.2 pkgsrc-2025Q1-base:1.2 pkgsrc-2024Q4:1.1.0.2 pkgsrc-2024Q4-base:1.1; locks; strict; comment @# @; 1.2 date 2025.02.02.14.25.35; author bacon; state Exp; branches; next 1.1; commitid uiYil0Ps5EiE1UHF; 1.1 date 2024.11.19.20.22.32; author bacon; state Exp; branches; next ; commitid Mp6qxFLRU0etpiyF; desc @@ 1.2 log @biology/sra-tools: Update to 3.2.0 Numerous fixes and enhancements Changes: https://github.com/ncbi/sra-tools/commits/master/ Reported by: portscout @ text @$NetBSD$ # Canonicalize examples dir --- ngs/ngs-sdk/examples/CMakeLists.txt.orig 2024-11-18 12:10:46.495627136 +0000 +++ ngs/ngs-sdk/examples/CMakeLists.txt @@@@ -62,14 +62,14 @@@@ if ( SINGLE_CONFIG ) install( FILES FragTest.cpp AlignTest.cpp AlignSliceTest.cpp PileupTest.cpp RefTest.cpp DumpReferenceFASTA.cpp expected.txt - DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples + DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples/sra-tools ) install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/Makefile.install - DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples + DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples/sra-tools RENAME Makefile ) install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/README.install - DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples + DESTINATION ${CMAKE_INSTALL_PREFIX}/share/examples/sra-tools RENAME README.txt ) endif() @ 1.1 log @biology/sra-tools: Update to 3.1.1 Numerous fixes and enhancements since 3.0.6 Changes: https://github.com/ncbi/sra-tools/commits/master/ All previous patches upstreamed Rewrote DESCR to be more introductory @ text @@