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locks; strict;
comment	@# @;


1.2
date	2005.11.03.19.45.20;	author rillig;	state Exp;
branches;
next	1.1;

1.1
date	2003.09.27.23.18.27;	author jschauma;	state Exp;
branches
	1.1.1.1;
next	;

1.1.1.1
date	2003.09.27.23.18.27;	author jschauma;	state Exp;
branches;
next	;


desc
@@


1.2
log
@Profit has changed to versioned distfiles almost a year ago, so there's
no need to keep DIST_SUBDIR. Also fixed the misuse of WRKSRC to define
BUILD_DIRS.
@
text
@$NetBSD: patch-aa,v 1.1.1.1 2003/09/27 23:18:27 jschauma Exp $

--- src/Makefile.orig	2002-08-06 07:56:26.000000000 -0400
+++ src/Makefile	2003-09-27 19:11:59.000000000 -0400
@@@@ -7,7 +7,7 @@@@
 #
 # To allow decompression of gzipped PDB files on the fly, change the 
 # COPT line to
-COPT  = -DGUNZIP_SUPPORT -g
+COPT  = -DGUNZIP_SUPPORT
 # COPT  = 
 #
 LINK1 = 
@@@@ -29,11 +29,13 @@@@
 bioplib/LegalAtomSpec.o bioplib/GetPDBChainLabels.o bioplib/DupePDB.o \
 bioplib/TranslatePDB.o bioplib/AtomNameMatch.o bioplib/chindex.o
 
+all: profit
+
 profit : $(OFILES) $(LFILES)
-	$(CC) -g -o profit $(OFILES) $(LFILES) $(XMAS) -lm $(LINK2) $(XMASLIB)
+	$(CC) -o profit $(OFILES) ${LDFLAGS} $(LFILES) $(XMAS) -lm $(LINK2) $(XMASLIB)
    
 .c.o : $(IFILES)
-	$(CC) $(COPT) -o $@@ -c $<
+	$(CC) $(COPT) ${CFLAGS} -o $@@ -c $<
 
 clean :
 	/bin/rm $(OFILES) $(LFILES)
@


1.1
log
@Initial revision
@
text
@d1 1
a1 1
$NetBSD: $
d3 2
a4 2
--- Makefile.orig	2002-08-06 07:56:26.000000000 -0400
+++ Makefile	2003-09-27 19:11:59.000000000 -0400
@


1.1.1.1
log
@Initial import of profit, one of the many packages provided by
brook at biology dot nmsu dot edu and his team at NMSU.

ProFit (pronounced Pro-Fit, not profit!) is designed to be the ultimate
program for performing least squares fits of two protein structures. It
performs a very simple and basic function, but allows as much flexibility as
possible in performing this procedure. Thus one can specify subsets of atoms
to be considered, specify zones to be fitted by number, sequence, or by
sequence alignment. 
@
text
@@