head	1.2;
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	pkgsrc-2023Q4:1.1.0.4
	pkgsrc-2023Q4-base:1.1
	pkgsrc-2023Q3:1.1.0.2
	pkgsrc-2023Q3-base:1.1;
locks; strict;
comment	@# @;


1.2
date	2024.03.13.13.54.04;	author bacon;	state dead;
branches;
next	1.1;
commitid	n9gocd8So9chk02F;

1.1
date	2023.07.09.08.37.39;	author nia;	state Exp;
branches;
next	;
commitid	jx28FzJfYLofy6wE;


desc
@@


1.2
log
@biology/minimap2: Update to 2.27

Several new features and bug fixes since 2.24

Changes: https://github.com/lh3/minimap2/releases
Reported by: portscout
@
text
@$NetBSD: patch-Makefile,v 1.1 2023/07/09 08:37:39 nia Exp $

Honour CFLAGS/LDFLAGS. Hopefully fixes building on platforms where zlib
is installed from pkgsrc.

--- Makefile.orig	2021-12-26 20:14:54.000000000 +0000
+++ Makefile
@@@@ -1,4 +1,4 @@@@
-CFLAGS=		-g -Wall -O2 -Wc++-compat #-Wextra
+CFLAGS+=	-Wall -Wc++-compat #-Wextra
 CPPFLAGS=	-DHAVE_KALLOC
 INCLUDES=
 OBJS=		kthread.o kalloc.o misc.o bseq.o sketch.o sdust.o options.o index.o \
@@@@ -45,10 +45,10 @@@@ all:$(PROG)
 extra:all $(PROG_EXTRA)
 
 minimap2:main.o libminimap2.a
-		$(CC) $(CFLAGS) main.o -o $@@ -L. -lminimap2 $(LIBS)
+		$(CC) $(LDFLAGS) main.o -o $@@ -L. -lminimap2 $(LIBS)
 
 minimap2-lite:example.o libminimap2.a
-		$(CC) $(CFLAGS) $< -o $@@ -L. -lminimap2 $(LIBS)
+		$(CC) $(LDFLAGS) $< -o $@@ -L. -lminimap2 $(LIBS)
 
 libminimap2.a:$(OBJS)
 		$(AR) -csru $@@ $(OBJS)
@


1.1
log
@minimap2: Honour CFLAGS/LDFLAGS. Hopefully fixes build on platforms
where zlib is installed from pkgsrc.
@
text
@d1 1
a1 1
$NetBSD$
@