head 1.1; access; symbols pkgsrc-2026Q1:1.1.0.28 pkgsrc-2026Q1-base:1.1 pkgsrc-2025Q4:1.1.0.26 pkgsrc-2025Q4-base:1.1 pkgsrc-2025Q3:1.1.0.24 pkgsrc-2025Q3-base:1.1 pkgsrc-2025Q2:1.1.0.22 pkgsrc-2025Q2-base:1.1 pkgsrc-2025Q1:1.1.0.20 pkgsrc-2025Q1-base:1.1 pkgsrc-2024Q4:1.1.0.18 pkgsrc-2024Q4-base:1.1 pkgsrc-2024Q3:1.1.0.16 pkgsrc-2024Q3-base:1.1 pkgsrc-2024Q2:1.1.0.14 pkgsrc-2024Q2-base:1.1 pkgsrc-2024Q1:1.1.0.12 pkgsrc-2024Q1-base:1.1 pkgsrc-2023Q4:1.1.0.10 pkgsrc-2023Q4-base:1.1 pkgsrc-2023Q3:1.1.0.8 pkgsrc-2023Q3-base:1.1 pkgsrc-2023Q2:1.1.0.6 pkgsrc-2023Q2-base:1.1 pkgsrc-2023Q1:1.1.0.4 pkgsrc-2023Q1-base:1.1 pkgsrc-2022Q4:1.1.0.2 pkgsrc-2022Q4-base:1.1; locks; strict; comment @# @; 1.1 date 2022.11.06.23.01.18; author bacon; state Exp; branches; next ; commitid 40pk1CdjZrnHcH0E; desc @@ 1.1 log @biology/gffread: GFF/GTF format conversions, filtering, etc GFF/GTF utility providing format conversions, filtering, FASTA sequence extraction and more. The program gffread can be used to validate, filter, convert and perform various other operations on GFF files. Because the program shares the same GFF parser code with Cufflinks, Stringtie, and gffcompare, it could be used to verify that a GFF file from a certain annotation source is correctly "understood" by these programs. @ text @$NetBSD$ BLAKE2s (gffread-0.12.7.tar.gz) = 4f39c075ca17fe6813595dd7c8d1ff2ff829f76b3d5eed46e28c7cbdaca56255 SHA512 (gffread-0.12.7.tar.gz) = 33a2308caecd3e891788a76c6b68b79569afd8d0d749bf57a8c528550d26f7a7b61b8ca77e8a37e05a7dfaeac600470c255a22314ea94f63e2b2cac45674f97b Size (gffread-0.12.7.tar.gz) = 403734 bytes BLAKE2s (gpertea-gclib-v0.12.7.tar.gz) = 68a41720355aac7d8b0602a66c558cfdabd93594a9079761ab5332f7adece277 SHA512 (gpertea-gclib-v0.12.7.tar.gz) = 2ff7be21f8ae002afdd7e34b6200e308f87077331c174dbea863972a01a0b6758062accda431bb73ef45ae91db44871f9eb0f5ae4bd564252599236282e57f90 Size (gpertea-gclib-v0.12.7.tar.gz) = 259314 bytes SHA1 (patch-Makefile) = 07e83c4b17715f31f0429671dba703a8b1d31118 @