head 1.2; access; symbols pkgsrc-2023Q4:1.2.0.18 pkgsrc-2023Q4-base:1.2 pkgsrc-2023Q3:1.2.0.16 pkgsrc-2023Q3-base:1.2 pkgsrc-2023Q2:1.2.0.14 pkgsrc-2023Q2-base:1.2 pkgsrc-2023Q1:1.2.0.12 pkgsrc-2023Q1-base:1.2 pkgsrc-2022Q4:1.2.0.10 pkgsrc-2022Q4-base:1.2 pkgsrc-2022Q3:1.2.0.8 pkgsrc-2022Q3-base:1.2 pkgsrc-2022Q2:1.2.0.6 pkgsrc-2022Q2-base:1.2 pkgsrc-2022Q1:1.2.0.4 pkgsrc-2022Q1-base:1.2 pkgsrc-2021Q4:1.2.0.2 pkgsrc-2021Q4-base:1.2 pkgsrc-2021Q3:1.1.0.48 pkgsrc-2021Q3-base:1.1 pkgsrc-2021Q2:1.1.0.46 pkgsrc-2021Q2-base:1.1 pkgsrc-2021Q1:1.1.0.44 pkgsrc-2021Q1-base:1.1 pkgsrc-2020Q4:1.1.0.42 pkgsrc-2020Q4-base:1.1 pkgsrc-2020Q3:1.1.0.40 pkgsrc-2020Q3-base:1.1 pkgsrc-2020Q2:1.1.0.36 pkgsrc-2020Q2-base:1.1 pkgsrc-2020Q1:1.1.0.16 pkgsrc-2020Q1-base:1.1 pkgsrc-2019Q4:1.1.0.38 pkgsrc-2019Q4-base:1.1 pkgsrc-2019Q3:1.1.0.34 pkgsrc-2019Q3-base:1.1 pkgsrc-2019Q2:1.1.0.32 pkgsrc-2019Q2-base:1.1 pkgsrc-2019Q1:1.1.0.30 pkgsrc-2019Q1-base:1.1 pkgsrc-2018Q4:1.1.0.28 pkgsrc-2018Q4-base:1.1 pkgsrc-2018Q3:1.1.0.26 pkgsrc-2018Q3-base:1.1 pkgsrc-2018Q2:1.1.0.24 pkgsrc-2018Q2-base:1.1 pkgsrc-2018Q1:1.1.0.22 pkgsrc-2018Q1-base:1.1 pkgsrc-2017Q4:1.1.0.20 pkgsrc-2017Q4-base:1.1 pkgsrc-2017Q3:1.1.0.18 pkgsrc-2017Q3-base:1.1 pkgsrc-2017Q2:1.1.0.14 pkgsrc-2017Q2-base:1.1 pkgsrc-2017Q1:1.1.0.12 pkgsrc-2017Q1-base:1.1 pkgsrc-2016Q4:1.1.0.10 pkgsrc-2016Q4-base:1.1 pkgsrc-2016Q3:1.1.0.8 pkgsrc-2016Q3-base:1.1 pkgsrc-2016Q2:1.1.0.6 pkgsrc-2016Q2-base:1.1 pkgsrc-2016Q1:1.1.0.4 pkgsrc-2016Q1-base:1.1 pkgsrc-2015Q4:1.1.0.2 pkgsrc-2015Q4-base:1.1; locks; strict; comment @# @; 1.2 date 2021.12.17.17.57.55; author bacon; state Exp; branches; next 1.1; commitid JCa1xu9s1g33W1lD; 1.1 date 2015.10.12.16.48.08; author leot; state Exp; branches; next ; commitid lVaZmXbrkiDM7QEy; desc @@ 1.2 log @biology/cdhit: Update to 4.8.1 Add support for gzipped input Changes: https://github.com/weizhongli/cdhit/releases @ text @@@comment $NetBSD$ bin/FET.pl bin/cd-hit bin/cd-hit-2d bin/cd-hit-2d-para.pl bin/cd-hit-454 bin/cd-hit-clstr_2_blm8.pl bin/cd-hit-div bin/cd-hit-div.pl bin/cd-hit-est bin/cd-hit-est-2d bin/cd-hit-para.pl bin/clstr2tree.pl bin/clstr2txt.pl bin/clstr2xml.pl bin/clstr_cut.pl bin/clstr_list.pl bin/clstr_list_sort.pl bin/clstr_merge.pl bin/clstr_merge_noorder.pl bin/clstr_quality_eval.pl bin/clstr_quality_eval_by_link.pl bin/clstr_reduce.pl bin/clstr_renumber.pl bin/clstr_rep.pl bin/clstr_reps_faa_rev.pl bin/clstr_rev.pl bin/clstr_select.pl bin/clstr_select_rep.pl bin/clstr_size_histogram.pl bin/clstr_size_stat.pl bin/clstr_sort_by.pl bin/clstr_sort_prot_by.pl bin/clstr_sql_tbl.pl bin/clstr_sql_tbl_sort.pl bin/make_multi_seq.pl bin/plot_2d.pl bin/plot_len1.pl share/doc/cdhit/cdhit-user-guide.pdf @ 1.1 log @Import biology/cdhit as cdhit-4.6.4. Packaged in pkgsrc-wip by Jason Bacon. CD-HIT is a very widely used program for clustering and comparing protein or nucleotide sequences. @ text @d2 1 d7 1 d17 2 @