head 1.1; access; symbols pkgsrc-2023Q4:1.1.0.40 pkgsrc-2023Q4-base:1.1 pkgsrc-2023Q3:1.1.0.38 pkgsrc-2023Q3-base:1.1 pkgsrc-2023Q2:1.1.0.36 pkgsrc-2023Q2-base:1.1 pkgsrc-2023Q1:1.1.0.34 pkgsrc-2023Q1-base:1.1 pkgsrc-2022Q4:1.1.0.32 pkgsrc-2022Q4-base:1.1 pkgsrc-2022Q3:1.1.0.30 pkgsrc-2022Q3-base:1.1 pkgsrc-2022Q2:1.1.0.28 pkgsrc-2022Q2-base:1.1 pkgsrc-2022Q1:1.1.0.26 pkgsrc-2022Q1-base:1.1 pkgsrc-2021Q4:1.1.0.24 pkgsrc-2021Q4-base:1.1 pkgsrc-2021Q3:1.1.0.22 pkgsrc-2021Q3-base:1.1 pkgsrc-2021Q2:1.1.0.20 pkgsrc-2021Q2-base:1.1 pkgsrc-2021Q1:1.1.0.18 pkgsrc-2021Q1-base:1.1 pkgsrc-2020Q4:1.1.0.16 pkgsrc-2020Q4-base:1.1 pkgsrc-2020Q3:1.1.0.14 pkgsrc-2020Q3-base:1.1 pkgsrc-2020Q2:1.1.0.12 pkgsrc-2020Q2-base:1.1 pkgsrc-2020Q1:1.1.0.8 pkgsrc-2020Q1-base:1.1 pkgsrc-2019Q4:1.1.0.10 pkgsrc-2019Q4-base:1.1 pkgsrc-2019Q3:1.1.0.6 pkgsrc-2019Q3-base:1.1 pkgsrc-2019Q2:1.1.0.4 pkgsrc-2019Q2-base:1.1 pkgsrc-2019Q1:1.1.0.2 pkgsrc-2019Q1-base:1.1; locks; strict; comment @# @; 1.1 date 2019.01.07.02.33.17; author bacon; state Exp; branches; next ; commitid HfnComiKFLAHnN6B; desc @@ 1.1 log @biology/canu: import canu-1.8 Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences @ text @Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences @